Recurring Design Logic in Living Systems

attractants, Bacillus subtilis, bacteria, biological systems, biology, bioluminescence, chemotaxis, Complexity, Darwin's Black Box, E. coli, Evolution, genes, Intelligent Design, Jonathan McLatchie, Michael Behe, musicians, outer membrane, painters, poisons, proteins, Salmonella, signal transduction, sporulation, toxins
Architects, painters, musicians, and other creators apply recognizable patterns of thinking to their craft. Source
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Do Large Genetic Differences Between Humans and Chimps Represent “Technical Failures”? 

1 percent myth, alignment failure, biological processes, chimps, Chimps and Critics (series), common ancestry, deletions, DNA, Evolution, gap divergence, genes, genetic differences, genetics, genome, haplotype, Human Origins and Anthropology, humans, insertions, megabases, Nature (journal), repetitive elements, sequence alignment, Supplemental Data, technical problems
The insinuation is that something went wrong in the lab during the attempted alignment process. Source
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Physicist Brian Miller: The Non-Algorithmic Nature of Life

algorithms, Brian Miller, cognition, David Klinghoffer, decision-making, DNA, embryos, Evolution, genes, genetics, Harvard University, ID The Future, immaterial genome, information, Intelligent Design, life, Michael Levin, nucleotide alteration, physicalism, physicists, Plato's Revenge, Platonic forms, Podcast, purpose, René Thom, Richard Sternberg, scientific revolution, software, splicing, teleonomy, Tufts University
Immaterial? As in not material? It’s a daring proposition, to be sure, and one that has the power to change everything we understand about life. Source
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Doctor’s Diary: I Couldn’t Put Plato’s Revenge Down

biology, brain, Brian Miller, chemicals, chess pieces, Complexity, concertos, David Klinghoffer, Doctor's Diary, double helix, egg, electric cords, embryo, Evolution, eyes, gene pool, genes, humor, information, Intelligent Design, Leonardo da Vinci, Medicine, piano, Plato, Plato's Revenge, Richard Sternberg, skyscraper, sperm, Stephen Iacoboni, What Darwin Didn’t Know
I rarely read a book as quickly as I read this text, and I virtually never read a book twice. Source
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The Math Behind the Immaterial Genome 

algorithm, algorithmic information, carbohydrates, cognition, David Klinghoffer, death, deformations, development, DNA, egg, embryo, embryology, Evolution, fetus, genes, immaterial genome, infant, information, instructions, Intelligent Design, lipids, mathematics, mutations, Mycoplasma genitalium, Plato, Plato's Revenge, preformationist, proteins, Richard Sternberg, RNA, scientific reasoning, simulation software package, trans-computational, zygote
While not a formal defense, this analysis aims to give readers an intuitive grasp of the reasoning behind Richard Sternberg's Platonic perspective. Source
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Plato’s Revenge: Intelligent Design in Real Time

agency, Archaeology, Big Bang, biology, Brian Miller, Cambrian Explosion, cell, complex and specified information, DNA, embryo, Evolution, evolutionary, evolutionism, genes, Heresy, historical science, history, immaterial genome, intelligent cause, Intelligent Design, J. Scott Turner, National Museum of Natural History, peer-reviewed literature, philosophy, Plato, Plato's Revenge, Platonism, purpose, Richard Sternberg, Smithsonian Institution, Stephen Meyer, Wall Street Journal
David Klinghoffer engages Richard Sternberg’s big questions, and a number of his own, on philosophical, scientific, and even highly personal planes. Source
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Extraterrestrial Life Would Demonstrate Human Exceptionalism

cabbage, carrots, Charles Darwin, civilizations, Copernican moment, earth, Evolution, extraterrestrial life, Francis Crick, genes, history, human beings, human exceptionalism, Human Genome Project, Intelligent Design, life, machinery, Matt Ridley, music, natural selection, Nicolaus Copernicus, Planetology, planets, sun
I hope we do find life elsewhere. It would be another step in our advancement as a species. Source
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Richard Sternberg on the Information Beyond the Genome

artificial life, biologic institute, cell, Center for Science and Culture, Discovery Institute, Evolution, genes, ID The Future, Intelligent Design, Irreducible Complexity, logic, machines, matheamtics, Podcast, Research, Richard Sternberg, Smithsonian Institution
There’s “something phenomenal” going on inside the cell, says Dr. Sternberg. Probing and elucidating this mystery has been a focus of his research. Source
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Here’s the Other Common Objection to Intelligent Design — Answered

adaptations, Armin Moczek, automobile lineages, automobiles, bats, BIO-Complexity, biology, cars, convergence, creator, dependency graph, dolphins, echolocation, Evolution, Evolution News, Faith & Science, Field Museum of Natural History, genes, George Gaylord Simpson, history of life, humans, improvements, Indiana University, Intelligent Design, life, magic wand, New York Times, PDE2D, physics, planning, software, Technology, testing, The Guardian, The Mathematical Intelligencer, theology, unintelligent process, Why Evolution Is Different, Winston Ewert
If you asked me, “Do you believe in evolution?” I would reply “I believe in the evolution of life, and the evolution of automobiles." Source
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Recurring Design Logic in Gene Regulation

Aliivibro fischeri, architect, autoinducer, autophosphorylation, bacteria, biology, CheB, chemical gradient, chemotaxis, CheW, CheY, common descent, design logic, diffusion rate, EnvZ, Evolution, genes, histidine, Intelligent Design, kinase, methyl-accepting chemotaxis proteins, methyltransferase, OmpR, Pseudomonas aeruginosa, quorum sensing, recurring design logic, regulatory systems, two-component systems
A feature of biology that has struck me over the years is the phenomenon of recurring design logic, across systems that do not appear to be related by descent. Source
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