Brain as a Quantum System: Theory Gets New Traction

Al Gore, anesthesiologists, Astonishing Hypothesis, behavior, Bill Clinton, birds, brain tissue, consciousness, Dorje C. Brody, Francis Crick, George Musser, human mind, internal compass, materialism, Medicine, neurons, Neuroscience & Mind, New Scientist, Orch Or Theory, organoids, proteins, Putting Ourselves Back in the Equation, quantum computation, Roger Penrose, Stuart Hameroff, Trinity College Dublin, University of Surrey
Hameroff and Penrose’s Orch Or Theory sees consciousness as the outcome of a quantum collapse of a wave function. Source
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Physics and Chemistry Could Not Give Rise to Biology

behavior, Big Bang, biological complexity, biology, Brian Miller, Casey Luskin, Chemistry, convergence, death, Diversity, Douglas Axe, electrostatic laws, environmental conditions, enzymes, equilibrium, Evolution, evolutionary algorithms, first law of thermodynamics, George Ellis, gravity, initial conditions, Intelligent Design, laws of forms, laws of nature, leaves, mass-energy, material mechanisms, natural selection, Nature (journal), nucleotide sequences, periodic table of elements, phenotypic plasticity, physics, proteins, quantum physics, Rope Kojonen, Second Law of Thermodynamics, stem cells, Stephen Dilley, structuralism, The Compatibility of Evolution and Design, The Compatibility of Evolution and Design (series)
The laws of nature provide stable conditions and physical boundaries within which biological outcomes are possible. Source
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Co-Option and Protein Homology Don’t Explain the Evolution of the Flagellum

author, bacteria, bacterial flagellum, Brian Miller, co-option, coordination, Darwin Devolves, Darwin's Black Box, Emily Reeves, Evolution, evolutionary models, flagellar assembly, flagellar function, H. Allen Orr, indirect evolution, Intelligent Design, Irreducible Complexity, mental agent, Michael Behe, Nicholas Matzke, protein homology, proteins, Rope Kojonen, Stephen Dilley, synchronization, T3SS, The Compatibility of Evolution and Design, The Compatibility of Evolution and Design (series), Type 3 Secretory System
Rope Kojonen wants to join “design and evolution,” but only by setting aside some of the main features of the flagellum. Source
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To Understand Nature’s Intentionality, We Must Go Back to the Future

"God of the gaps", Aristotle, body, causation, Christianity, DNA, Evolution, Intelligent Design, Isaac Newton, Johannes Kepler, Jonathan Wells, Michael Behe, mind, Nicolaus Copernicus, Pierre-Simon Laplace, proteins, René Descartes, ribosomes, science of purpose, scientism, soul, Stephen Meyer, subject-object metaphysics, Thomas Aquinas, William Dembski
It required the truly inimitable intellect of Aquinas to Christianize and modernize what Aristotle had said 1,600 years before him. Source
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The Best and Worst Heuristics for Biological Discovery

biology, Cell (journal), cellular activity, cryoelectron tomography, cytoplasmic lattices, embryo, embryonic arrest, embryonic development, epigenetic reprogramming, Evolution, filaments, heuristic, Intelligent Design, intermediate filaments, mammalian development, mammalian yolk, mammals, microscopy, oocytes, PADI6, proteins, ribosomal arrays, subcortical maternal complex
"We don’t know what this structure does, so it probably does nothing. Remember, evolution produces a lot of non-functional debris." Source
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Former “Junk DNA,” STRs Found to Be “Rheostats” that “Precisely Regulate Gene Expression”

autism, binding kinetics, biology, cancer, Crohn’s disease, DNA, eukaryotes, Evolution, fine-tuning, gene expression, Genomics Proteomics & Bioinformatics, heaters, human genome, Intelligent Design, Junk DNA, light dimmer, motor speed, motors, mutations, nucleotides, ovens, phenotypes, power control, proteins, regulatory elements, repetitive elements, rheostat, schizophrenia, Science (journal), Short Tandem Repeats, STRs, transcription factor
Rheostats are “often used as power control devices, for example to control light intensity (dimmer), speed of motors, heaters, and ovens.” Source
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Is the Cell a Machine, or More Like a Mind? 

Barbara McClintock, cell, cellular architecture, cellular behavior, cellular cognition, Chance and Necessity, circuitry, cognition, conformation, Daniel Nicholson, DNA, electronic circuitry, function, functional promiscuity, Intelligent Design, intracellular transport, Jacques Monod, Journal of Theoretical Biology, lymphotactin, machine, machine conception of the cell, machine metaphor, membranes, molecular biology, neural circuitry, Neuroscience & Mind, nucleic acids, proteins, self-assembly, Sewall Wright, wiring
At least as we’re accustomed to thinking in our age of AI, the alternative to a machine is a mind. Source
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Introducing the Unknome, Biology’s Black Box

23andMe, Advanced Biology, Alireza Mashaghi, biochemistry, biology, central dogma, Complexity, DNA transcripts, genetics, genome, genomics, Harvard University, information, Intelligent Design, interactome, Leiden University, Life Sciences, metabolites, metabolome, molecular biology, mouse, neurons, omics, protein unfolding, proteins, proteomics, Public Library of Science, Science (journal), transcriptome, transcriptomics, unknome, Unknown Genome Project
Biology is becoming overwhelmed by new vistas of dynamic complexity. Attempts to get a handle on this complexity has ushered in the era of Omics. Source
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Cell Vesicles Wear Sophisticated Coats, Defying Unguided Evolutionary Explanations

biology, clathrin-coated vesicle, Coat Protein 1, Coat Protein 2, coat proteins, conformations, EMBL Heidelberg, endoplasmic reticulum, European Molecular Biology Laboratory, Evolution, geodesic dome, Golgi apparatus, hexagons, humans, Intelligent Design, invagination, Latin, lattice, pentagons, protein coats, proteins, Science (journal), self-driving cars, triads, triskelion, vesicles, yeast
These coats, and the accessory proteins that build them, attach them to vesicles, and disassemble them, exhibit irreducible complexity. Source
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Answering Farina on Behe’s Work: Bacterial Flagella

bacterial flagellum, braking system, bushing, bushings, cell membrane, clutch, Dave Farina, David Snoke, drive shaft, Evolution, flagellar synthesis, FleQ, Intelligent Design, Kenneth Miller, Kitzmiller v. Dover Area School District, machine, machinery, Michael Behe, microorganisms, mutation rate, natural selection, nitrogen metabolism, NtrC, outboard motor, point mutations, population size, Professor Dave, protein science, proteins, Pseudomonas fluorescens, terminology, The Scientist, Theoretical Population Biology, twitching motility, type IV pilis, universal joint, YouTubers
The video complains about Behe’s “usage of terminology pertaining to machinery.” Is Farina going to charge the entire flagella community with dishonesty? Source
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